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Crystal structure of Alcohol dehydrogenase (TM0436) from Thermotoga maritima at 2.00 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION,SITTING DROP,NANODROP 293 8.5 Bicine 35 PEG-400 10 Glycerol 5 PEG-3000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.25 44.82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.88 α = 90 b = 104.919 β = 90 c = 161.617 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2003-10-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 92.86 99.2 0.073 11.4 3.7 106273 33.62
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.05 94.3 0.441 3.1 2.8 7342
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 80.53 104062 2093 99.09 0.14637 0.14539 0.1567 0.1939 0.1961 RANDOM 27.379
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.11 -0.21 1.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.714 r_dihedral_angle_4_deg 17.807 r_dihedral_angle_3_deg 13.481 r_dihedral_angle_1_deg 6.119 r_scangle_it 3.929 r_scbond_it 2.59 r_angle_refined_deg 1.591 r_mcangle_it 1.492 r_mcbond_it 1.146 r_angle_other_deg 0.871
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.714 r_dihedral_angle_4_deg 17.807 r_dihedral_angle_3_deg 13.481 r_dihedral_angle_1_deg 6.119 r_scangle_it 3.929 r_scbond_it 2.59 r_angle_refined_deg 1.591 r_mcangle_it 1.492 r_mcbond_it 1.146 r_angle_other_deg 0.871 r_symmetry_vdw_other 0.299 r_mcbond_other 0.295 r_symmetry_vdw_refined 0.239 r_nbd_refined 0.226 r_xyhbond_nbd_refined 0.191 r_nbd_other 0.188 r_symmetry_hbond_refined 0.151 r_chiral_restr 0.1 r_nbtor_other 0.085 r_bond_refined_d 0.017 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11253 Nucleic Acid Atoms Solvent Atoms 1178 Heterogen Atoms 20
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling MOLREP phasing REFMAC refinement CCP4 data scaling