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Pseudomonas fluorescens aryl esterase
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1A8S
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 293 1% PEG 400, 1.65M (NH4)2SO4, 0.1M HEPES , pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 4.3 71.41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 146.04 α = 90 b = 146.04 β = 90 c = 129.88 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 IMAGE PLATE RIGAKU RAXIS HTC Osmic mirrors 2003-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 48.8 95.2 0.066 14 5.04 285139 271452 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.804 1.851 65.8 0.247 3.7 2.43 1314
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1A8S 1.804 48.53 285139 271452 27113 95.15 0.175 0.1719 0.202 0.1972 RANDOM 18.672
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.01 0.01 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.553 r_scangle_it 4.273 r_scbond_it 2.729 r_angle_refined_deg 1.59 r_mcangle_it 1.489 r_mcbond_it 0.852 r_nbd_refined 0.214 r_symmetry_vdw_refined 0.149 r_chiral_restr 0.132 r_xyhbond_nbd_refined 0.127
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.553 r_scangle_it 4.273 r_scbond_it 2.729 r_angle_refined_deg 1.59 r_mcangle_it 1.489 r_mcbond_it 0.852 r_nbd_refined 0.214 r_symmetry_vdw_refined 0.149 r_chiral_restr 0.132 r_xyhbond_nbd_refined 0.127 r_symmetry_hbond_refined 0.125 r_bond_refined_d 0.023 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12714 Nucleic Acid Atoms Solvent Atoms 1362 Heterogen Atoms 120
Software Software Software Name Purpose REFMAC refinement CrystalClear data reduction d*TREK data scaling MOLREP phasing