1V92
Solution structure of the UBA domain from p47, a major cofactor of the AAA ATPase p97
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 15N, 13C double labelled p47 residues 1-174 | 20mM sodium acetate | 20mM NaAc | 5.3 | 1 atm | 298 | |
2 | 3D_15N-separated_NOESY | 15N labelled p47 residues 1-174 | 20mM sodium acetate | 20mM NaAc | 5.3 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing torsion angle dynamics | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 1.0 | F.Delaglio |
2 | collection | XwinNMR | 1.0 | Burker |
3 | data analysis | NMRView | 4.0.3 | B.Johnson |
4 | structure solution | ARIA | 1.0 | M.Nilges, J.P.Linge |
5 | refinement | ARIA | 1.0 | M.Nilges, J.P.Linge |