1V28

Solution structure of paralytic peptide of the wild Silkmoth, Antheraea yamamai


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1DQF-COSY3mM Paralytic peptide; pH 4.4(pH was adjusted by HCl and NaOH); 90% H2O, 10% D2O90% H2O/10% D2O4.4ambient293
22D TOCSY3mM Paralytic peptide; pH 4.4(pH was adjusted by HCl and NaOH); 90% H2O, 10% D2O90% H2O/10% D2O4.4ambient293
32D NOESY3mM Paralytic peptide; pH 4.4(pH was adjusted by HCl and NaOH); 90% H2O, 10% D2O90% H2O/10% D2O4.4ambient293
4E-COSY3mM Paralytic peptide; pH 4.4(pH was adjusted by HCl and NaOH); 99% D2O99% D2O4.4ambient293
52D NOESY3mM Paralytic peptide; pH 4.4(pH was adjusted by HCl and NaOH); 99% D2O99% D2O4.4ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
2JEOLALPHA600
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealingthe structures are based on a total of 189 restraints, 165 are NOE-derived distance constraints, 12 dihedral angle restraints, 12 distance restraints from hydrogen bonds.X-PLOR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number25
Representative Model11 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR3.851Michael Nilges, John Kuszewski, Axel T. Brunger