1UW0
Solution structure of the zinc-finger domain from DNA ligase IIIa
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 6.8 | 1 atm | 300 | ||||
2 | COSY | 6.8 | 1 atm | 300 | ||||
3 | TOCSY | 6.8 | 1 atm | 300 | ||||
4 | HSQC | 6.8 | 1 atm | 300 | ||||
5 | CBCANH | 6.8 | 1 atm | 300 | ||||
6 | CBCACONH | 6.8 | 1 atm | 300 | ||||
7 | HBHANH | 6.8 | 1 atm | 300 | ||||
8 | HBHACONH | 6.8 | 1 atm | 300 | ||||
9 | HCCH-TOCSY | 6.8 | 1 atm | 300 | ||||
10 | HCCH-COSY | 6.8 | 1 atm | 300 | ||||
11 | 15N NOESY-HSQC | 6.8 | 1 atm | 300 | ||||
12 | 15N HSQC-NOESY-HSQC | 6.8 | 1 atm | 300 | ||||
13 | 13C NOESY-HSQC | 6.8 | 1 atm | 300 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DMX | 600 |
3 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE | X-PLOR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | LOW RESTRAINT VIOLATIONS |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 28 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
---|---|
Details | THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED DNA-LIGASE III ZINC FINGER DOMAIN. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.8 | BRUNGER |
2 | structure solution | XwinNMR | ||
3 | structure solution | Sparky | ||
4 | structure solution | X-PLOR |