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Complex of E. Coli DraE adhesin with Chloramphenicol
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1USZ PDB ENTRY 1USZ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 1.7 M AMMONIUM SULPHATE 0.1M TRIS-HCL PH 7.0, 2.8 MM CHLORAMPHENICOL
Crystal Properties Matthews coefficient Solvent content 2.42 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 118.969 α = 90 b = 118.969 β = 90 c = 57.416 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2003-10-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 15 99.8 0.12 4.2 5.8 71543 0.65
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 2 100 0.33 1.4 5.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1USZ 1.9 15 71513 71513 3560 99.8 0.193 0.193 0.191 0.225 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 17.863 t_it 1.301 t_angle_deg 0.847 t_nbd 0.069 t_gen_planes 0.02 t_trig_c_planes 0.012 t_bond_d 0.008 t_incorr_chiral_ct t_pseud_angle t_omega_torsion
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 17.863 t_it 1.301 t_angle_deg 0.847 t_nbd 0.069 t_gen_planes 0.02 t_trig_c_planes 0.012 t_bond_d 0.008 t_incorr_chiral_ct t_pseud_angle t_omega_torsion t_other_torsion t_improper_torsion t_chiral_improper_torsion t_sum_occupancies t_utility_distance t_utility_angle t_utility_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6309 Nucleic Acid Atoms Solvent Atoms 710 Heterogen Atoms 234
Software Software Software Name Purpose TNT refinement MOSFLM data reduction SCALA data scaling MOLREP phasing