1UM1
Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 0.7mM PDZ domain U-15N, 13C; 20mM Tris-HCl (pH 7.0); 100mM NaCl; 0.02% NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O | 120mM NaCl | 7.0 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | 0.7mM PDZ domain U-15N, 13C; 20mM Tris-HCl (pH 7.0); 100mM NaCl; 0.02% NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O | 120mM NaCl | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations, structures with the lowest energy, target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1C | Varian |
2 | processing | NMRPipe | 20020425 | Delaglio, F. |
3 | data analysis | NMRView | 5.0.4 | Johnson, B. A. |
4 | data analysis | KUJIRA | 0.816 | Kobayashi, N. |
5 | structure solution | CYANA | 1.0.7 | Guentert, P. |
6 | refinement | CYANA | 1.0.7 | Guentert, P. |