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Non-fusion GST from S. japonicum in complex with glutathione
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 295 ammonium sulfate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.31 46.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.527 α = 90 b = 92.527 β = 90 c = 57.657 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 50 97.5 0.1 10.7 4.1 8868 8868 -3 -3 38
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.6 99.7 0.465 3 4.1 974
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.5 20 -3 8851 8851 443 97.63 0.17182 0.17182 0.16905 0.1796 0.22134 0.2264 RANDOM 21.031
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.86 0.86 -1.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.092 r_mcangle_it 1.782 r_scangle_it 1.672 r_angle_refined_deg 1.328 r_mcbond_it 1.058 r_scbond_it 1.038 r_angle_other_deg 0.792 r_symmetry_hbond_refined 0.246 r_symmetry_vdw_other 0.228 r_nbd_other 0.221
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.092 r_mcangle_it 1.782 r_scangle_it 1.672 r_angle_refined_deg 1.328 r_mcbond_it 1.058 r_scbond_it 1.038 r_angle_other_deg 0.792 r_symmetry_hbond_refined 0.246 r_symmetry_vdw_other 0.228 r_nbd_other 0.221 r_symmetry_vdw_refined 0.21 r_nbd_refined 0.196 r_xyhbond_nbd_refined 0.173 r_nbtor_other 0.093 r_chiral_restr 0.072 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1770 Nucleic Acid Atoms Solvent Atoms 116 Heterogen Atoms 25
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling AMoRE phasing