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Crystal Structure of the Unphosphorylated Kinase Domain of the Tyrosine Kinase ACK1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.5 291 PEG 4000, magnesium chloride, sodium chloride, HEPES, TRIS, TCEP, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.1 40.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.176 α = 90 b = 43.401 β = 111.82 c = 84.452 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2002-11-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 1.08 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 100 0.078 11.8 3.8 37422 37411 25.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.11 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 30 37401 35515 1886 99.98 0.202 0.20201 0.19944 0.2082 0.2493 0.2482 RANDOM 29.916
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.58 -1.07 2.19 -1.41
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.14 r_scangle_it 4.204 r_scbond_it 2.659 r_mcangle_it 1.932 r_angle_refined_deg 1.705 r_mcbond_it 1.088 r_angle_other_deg 0.915 r_symmetry_vdw_other 0.279 r_symmetry_hbond_refined 0.244 r_nbd_other 0.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.14 r_scangle_it 4.204 r_scbond_it 2.659 r_mcangle_it 1.932 r_angle_refined_deg 1.705 r_mcbond_it 1.088 r_angle_other_deg 0.915 r_symmetry_vdw_other 0.279 r_symmetry_hbond_refined 0.244 r_nbd_other 0.24 r_nbd_refined 0.21 r_xyhbond_nbd_refined 0.152 r_symmetry_vdw_refined 0.145 r_chiral_restr 0.107 r_nbtor_other 0.087 r_bond_refined_d 0.02 r_gen_planes_other 0.011 r_gen_planes_refined 0.01 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4109 Nucleic Acid Atoms Solvent Atoms 230 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling EPMR phasing