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Crystal Structure of the Staphylococcus aureus pI258 CadC
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 296 ammonium sulfate, sodium citrate, methanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystal Properties Matthews coefficient Solvent content 2.6 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 116.536 α = 90 b = 116.536 β = 90 c = 41.842 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-07-22 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C 0.9000, 0.9795, 0.9793, 0.9563 APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 119 95.6 0.045 28 3.5 44819 40693
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.95 99.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.9 32.63 44819 40693 2152 95.58 0.236 0.20774 0.20496 0.2049 0.26112 0.261 RANDOM 42.06
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.91 0.91 -1.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.78 r_dihedral_angle_4_deg 18.719 r_dihedral_angle_3_deg 17.243 r_dihedral_angle_1_deg 8.154 r_scangle_it 4.962 r_scbond_it 3.394 r_mcangle_it 1.996 r_angle_refined_deg 1.765 r_mcbond_it 1.261 r_nbtor_refined 0.306
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.78 r_dihedral_angle_4_deg 18.719 r_dihedral_angle_3_deg 17.243 r_dihedral_angle_1_deg 8.154 r_scangle_it 4.962 r_scbond_it 3.394 r_mcangle_it 1.996 r_angle_refined_deg 1.765 r_mcbond_it 1.261 r_nbtor_refined 0.306 r_symmetry_vdw_refined 0.256 r_nbd_refined 0.237 r_xyhbond_nbd_refined 0.217 r_symmetry_hbond_refined 0.182 r_metal_ion_refined 0.16 r_chiral_restr 0.148 r_bond_refined_d 0.019 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3151 Nucleic Acid Atoms Solvent Atoms 470 Heterogen Atoms 3
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling MLPHARE phasing