1TR6
NMR solution structure of omega-conotoxin [K10]GVIA, a cyclic cysteine knot peptide
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D TOCSY | 2 mM [K10]GVIA, DSS | 95% H2O/5% D2O | 3.5 | ambient | 275 | ||
2 | 2D NOESY | 2 mM [K10]GVIA, DSS | 95% H2O/5% D2O | 3.5 | ambient | 275 | ||
3 | DQF-COSY | 2 mM [K10]GVIA, DSS | 95% H2O/5% D2O | 3.5 | ambient | 275 | ||
4 | 2D TOCSY | 2 mM [K10]GVIA, DSS | 100% D2O | 3.5 | ambient | 275 | ||
5 | 2D NOESY | 2 mM [K10]GVIA, DSS | 100% D2O | 3.5 | ambient | 275 | ||
6 | E-COSY | 2 mM [K10]GVIA, DSS | 100% D2O | 3.5 | ambient | 275 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | ARX | 500 |
2 | Bruker | DMX | 750 |
3 | Bruker | Avance | 600 |
NMR Refinement | ||
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Method | Details | Software |
The structures were calculated using torsion angle dynamics/simulated annealing protocol | A total of 467 NOE distance restraints (including H-bonds) and 22 dihedral angle restraints (16 phi and 6 chi) were used during structure calculations. | XWINNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XWINNMR | 3.5 | |
2 | structure solution | X-PLOR | 3.851 | |
3 | refinement | X-PLOR | 3.851 |