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Crystal structure of human adipocyte fatty acid binding protein in complex with a non-covalent ligand
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 PEG2000, DMSO, TRIS, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.05 40
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.829 α = 90 b = 53.106 β = 90 c = 31.383 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV 2000-10-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 15 98.5 0.064 17.9 3.3 8483
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.07 93.5 0.209 4.4 792
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2 15 7997 380 98.01 0.20372 0.20032 0.2088 0.27947 RANDOM 25.467
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.13 -0.46 1.59
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.262 r_dihedral_angle_4_deg 19.368 r_dihedral_angle_3_deg 13.726 r_dihedral_angle_1_deg 6.007 r_scangle_it 3.05 r_scbond_it 1.872 r_mcangle_it 1.247 r_angle_refined_deg 1.21 r_mcbond_it 0.811 r_chiral_restr 0.31
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.262 r_dihedral_angle_4_deg 19.368 r_dihedral_angle_3_deg 13.726 r_dihedral_angle_1_deg 6.007 r_scangle_it 3.05 r_scbond_it 1.872 r_mcangle_it 1.247 r_angle_refined_deg 1.21 r_mcbond_it 0.811 r_chiral_restr 0.31 r_nbtor_refined 0.303 r_symmetry_vdw_refined 0.239 r_nbd_refined 0.185 r_xyhbond_nbd_refined 0.152 r_symmetry_hbond_refined 0.091 r_bond_refined_d 0.011 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1021 Nucleic Acid Atoms Solvent Atoms 134 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing