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CHEY FROM THERMOTOGA MARITIMA (APO-I)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3CHY PDB ENTRY 3CHY
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 PROTEIN WAS CRYSTALLIZED FROM 0.1M TRIS BUFFER (PH 8.5) AND 1.8M AMMONIUM PHOSPHATE
Crystal Properties Matthews coefficient Solvent content 2.2 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.04 α = 90 b = 53.95 β = 95.56 c = 34.16 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 IMAGE PLATE RIGAKU RAXIS II COLLIMATOR 1995-01-19 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 20 83 0.053 5.5 2.5 7985 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 2.25 69 0.12 3 1.5
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION SIRAS / MOLECULAR REPLACEMENT PDB ENTRY 3CHY 1.9 20 7985 7985 83 0.186
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 18.56 t_it 8.61 t_angle_deg 2.6 t_trig_c_planes 0.023 t_gen_planes 0.021 t_bond_d 0.017 t_nbd 0.016 t_incorr_chiral_ct t_pseud_angle
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 900 Nucleic Acid Atoms Solvent Atoms 15 Heterogen Atoms
Software Software Software Name Purpose RSS model building TNT refinement R-AXIS data reduction OSCILL data reduction R-AXIS data scaling SCALE data scaling RSS phasing