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CRYSTAL STRUCTURE OF THE COMPLEX OF SUBTILISIN BPN' WITH CHYMOTRYPSIN INHIBITOR 2
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1TM3 PDB Entry 1TM3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.6 277 sodium citrate, isopropanol, PEG 4000, xylitol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.4 63.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 93.72 α = 90 b = 93.72 β = 90 c = 185.853 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-06-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 1.0 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 81.65 98.2 0.068 13.9 4.8 52791 52791 -3 -3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (I) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB Entry 1TM3 1.7 81.65 -3 -3 52788 50141 2647 98.16 0.15241 0.15241 0.15085 0.1535 0.18168 0.1833 inherited from PDB entry 1TM3 18.044
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.14 0.07 0.14 -0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.818 r_scangle_it 4.528 r_scbond_it 2.719 r_angle_refined_deg 1.8 r_mcangle_it 1.581 r_mcbond_it 0.939 r_symmetry_vdw_refined 0.4 r_nbd_refined 0.216 r_xyhbond_nbd_refined 0.178 r_symmetry_hbond_refined 0.167
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.818 r_scangle_it 4.528 r_scbond_it 2.719 r_angle_refined_deg 1.8 r_mcangle_it 1.581 r_mcbond_it 0.939 r_symmetry_vdw_refined 0.4 r_nbd_refined 0.216 r_xyhbond_nbd_refined 0.178 r_symmetry_hbond_refined 0.167 r_chiral_restr 0.135 r_metal_ion_refined 0.077 r_bond_refined_d 0.02 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2560 Nucleic Acid Atoms Solvent Atoms 511 Heterogen Atoms 82
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling TRUNCATE data scaling EPMR phasing