☰ Navigation Tabs
HUMAN TRANSFORMING GROWTH FACTOR-BETA 3, CRYSTALLIZED FROM DIOXANE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other TGF-BETA2 (SCHLUNEGGER & GRUETTER)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 15% (V/V) DIOXANE, 100 MM SODIUM ACETATE, PH 5.0
Crystal Properties Matthews coefficient Solvent content 2.25 43.37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.3 α = 90 b = 49.3 β = 90 c = 78.9 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 DIFFRACTOMETER ENRAF-NONIUS FAST 1994-12-16 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR571
Data Collection Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.1 37.4 0.353
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MR TGF-BETA2 (SCHLUNEGGER & GRUETTER) 2 7 6127 76 0.175 0.175 0.1744 29.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.89 x_angle_deg 1.41 x_improper_angle_d 1.19 x_bond_d 0.07 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.89 x_angle_deg 1.41 x_improper_angle_d 1.19 x_bond_d 0.07 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot x_mcbond_it x_mcangle_it x_scbond_it x_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 890 Nucleic Acid Atoms Solvent Atoms 77 Heterogen Atoms 6
Software Software Software Name Purpose MADNES data collection ROTAVATA data reduction Agrovata data reduction X-PLOR model building X-PLOR refinement MADNES data reduction CCP4 data scaling ROTAVATA data scaling X-PLOR phasing