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Crystal structure of a hypothetical protein at 2.3 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 298 1.9 M Sodium Malonate, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.13 42.21
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.014 α = 90 b = 72.014 β = 90 c = 112.713 γ = 90
Symmetry Space Group I 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-06-29 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 0.9794, 0.9796, 0.9600 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 60 98 7056 6915
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.359 98
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.3 20 6570 6457 320 98.27 0.2215 0.21981 0.2378 0.25582 0.2613 RANDOM 24.217
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.46 0.46 -0.92
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.689 r_scangle_it 2.36 r_scbond_it 1.563 r_angle_refined_deg 1.362 r_mcangle_it 1.018 r_angle_other_deg 0.848 r_mcbond_it 0.552 r_xyhbond_nbd_refined 0.29 r_nbd_refined 0.236 r_nbd_other 0.231
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.689 r_scangle_it 2.36 r_scbond_it 1.563 r_angle_refined_deg 1.362 r_mcangle_it 1.018 r_angle_other_deg 0.848 r_mcbond_it 0.552 r_xyhbond_nbd_refined 0.29 r_nbd_refined 0.236 r_nbd_other 0.231 r_symmetry_vdw_other 0.217 r_symmetry_vdw_refined 0.149 r_nbtor_other 0.093 r_chiral_restr 0.083 r_bond_refined_d 0.012 r_gen_planes_refined 0.004 r_gen_planes_other 0.004 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1026 Nucleic Acid Atoms Solvent Atoms 22 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SOLVE phasing