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CRYSTAL STRUCTURE OF VANCOMYCIN AT ATOMIC RESOLUTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.8 PH 5.8
Crystal Properties Matthews coefficient Solvent content 2.9 57.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 28.48 α = 90 b = 28.48 β = 90 c = 65.83 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 125 IMAGE PLATE MARRESEARCH BENT CRYSTAL MONOCHROMATOR 1995-08-29 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.09 70 99.3 0.058 27 13.9 11867
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.09 1.17 100 0.083 19.7 6.8
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION AB INITIO 1.09 70 11867 99.3 0.105 0.1177
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 2 155 314.5
RMS Deviations Key Refinement Restraint Deviation s_approx_iso_adps 0.104 s_zero_chiral_vol 0.093 s_from_restr_planes 0.057 s_anti_bump_dis_restr 0.041 s_bond_d 0.024 s_similar_dist 0.022 s_similar_adp_cmpnt 0.017 s_rigid_bond_adp_cmpnt 0.003 s_angle_d s_non_zero_chiral_vol
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 160 Nucleic Acid Atoms Solvent Atoms 108 Heterogen Atoms 48
Software Software Software Name Purpose SHELX-96 model building SHELXL-96 refinement DENZO data reduction SCALEPACK data scaling SHELX-96 phasing