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Crystal structure of a cold adapted subtilisin-like serine proteinase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8 293 PEC 4000, isopropanol, HEPES, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.96 36.78
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.212 α = 90 b = 36.881 β = 97.8 c = 140.488 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD MAR CCD 165 mm 2004-01-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7A 1.0092 EMBL/DESY, HAMBURG BW7A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.81 40 0.067 12 3.6 37883 37883
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.81 1.87 100 0.496 2031
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.84 30 34113 3767 97.18 0.16 0.14632 0.14082 0.1537 0.19659 0.2036 RANDOM 11.925
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.73 0.56 -0.1 -0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.859 r_scangle_it 3.346 r_scbond_it 2.235 r_angle_refined_deg 1.521 r_angle_other_deg 1.294 r_mcangle_it 1.27 r_mcbond_it 0.761 r_nbd_other 0.252 r_symmetry_vdw_other 0.222 r_nbd_refined 0.216
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.859 r_scangle_it 3.346 r_scbond_it 2.235 r_angle_refined_deg 1.521 r_angle_other_deg 1.294 r_mcangle_it 1.27 r_mcbond_it 0.761 r_nbd_other 0.252 r_symmetry_vdw_other 0.222 r_nbd_refined 0.216 r_symmetry_hbond_refined 0.191 r_symmetry_vdw_refined 0.161 r_xyhbond_nbd_refined 0.158 r_chiral_restr 0.105 r_nbtor_other 0.087 r_metal_ion_refined 0.082 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3990 Nucleic Acid Atoms Solvent Atoms 593 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling MOLREP phasing