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Crystal structure of Rv1626
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 4 295 15 % PEG 1.5K, pure water, pH 4, Micro Batch, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.98 37.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.558 α = 90 b = 44.558 β = 90 c = 180.965 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-01-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7A 0.981 EMBL/DESY, HAMBURG BW7A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.68 40 99.9 0.036 32.9 11 22233 22233 18.16
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.68 25 20732 20724 1118 99.96 0.17429 0.17302 0.1708 0.2099 0.21637 0.2339 RANDOM 11.868
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.14 -0.14 0.27
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 14.015 r_sphericity_free 13.669 r_scangle_it 6.091 r_scbond_it 3.939 r_mcangle_it 2.307 r_mcbond_it 1.377 r_angle_refined_deg 0.947 r_angle_other_deg 0.622 r_symmetry_vdw_other 0.328 r_symmetry_vdw_refined 0.274
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 14.015 r_sphericity_free 13.669 r_scangle_it 6.091 r_scbond_it 3.939 r_mcangle_it 2.307 r_mcbond_it 1.377 r_angle_refined_deg 0.947 r_angle_other_deg 0.622 r_symmetry_vdw_other 0.328 r_symmetry_vdw_refined 0.274 r_nbd_other 0.265 r_nbd_refined 0.236 r_symmetry_hbond_refined 0.184 r_xyhbond_nbd_refined 0.172 r_nbtor_other 0.085 r_chiral_restr 0.067 r_bond_refined_d 0.01 r_gen_planes_refined 0.003 r_gen_planes_other 0.001 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1469 Nucleic Acid Atoms Solvent Atoms 206 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing