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SOYBEAN AGGLUTININ FROM GLYCINE MAX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.2 PROTEIN WAS CRYSTALLIZED FROM 0.1 M HEPES, PH 7.2 1MM CACL2, 1MM MNCL2 AND 0.15 M NACL
Crystal Properties Matthews coefficient Solvent content 5.7 78
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 143.3 α = 90 b = 143.3 β = 90 c = 107.8 γ = 120
Symmetry Space Group P 64 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 AREA DETECTOR SIEMENS COLLIMATOR 1993-12-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 99 84 0.139 0.139 4.1 3.7 16581 2 7.79
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.97 67 0.54 0.54 0.6 3
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR DYNAMICS VS 1SBA 2.8 99 16633 13948 84 0.212 0.2017
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation t_dihedral_angle_d 19.92 t_it 4.189 t_angle_deg 2.5 t_nbd 0.064 t_gen_planes 0.025 t_trig_c_planes 0.015 t_bond_d 0.013 t_incorr_chiral_ct t_pseud_angle
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1652 Nucleic Acid Atoms Solvent Atoms 20 Heterogen Atoms 41
Software Software Software Name Purpose X-PLOR model building TNT refinement X-PLOR refinement XENGEN data reduction XENGEN data scaling X-PLOR phasing