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Crystal Structure of "Truncated" Hemoglobin N (HbN) from Mycobacterium tuberculosis, Soaked with Butyl-isocyanide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.7 277 phosphate, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.07 40.13
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.534 α = 90 b = 61.432 β = 90 c = 91.785 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2002-12-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.933 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 20 14957
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 20 12993 691 91.5 0.1967 0.1967 0.19393 0.2041 0.25062 0.2632 RANDOM 26.216
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.78 3.6 -2.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.194 r_angle_other_deg 3.553 r_scangle_it 2.872 r_scbond_it 1.828 r_angle_refined_deg 1.335 r_mcangle_it 1.115 r_mcbond_it 0.607 r_metal_ion_refined 0.499 r_nbd_refined 0.387 r_symmetry_vdw_other 0.339
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.194 r_angle_other_deg 3.553 r_scangle_it 2.872 r_scbond_it 1.828 r_angle_refined_deg 1.335 r_mcangle_it 1.115 r_mcbond_it 0.607 r_metal_ion_refined 0.499 r_nbd_refined 0.387 r_symmetry_vdw_other 0.339 r_nbd_other 0.308 r_symmetry_vdw_refined 0.299 r_symmetry_hbond_refined 0.233 r_xyhbond_nbd_refined 0.224 r_nbtor_other 0.108 r_chiral_restr 0.065 r_bond_refined_d 0.012 r_gen_planes_refined 0.005 r_gen_planes_other 0.005 r_bond_other_d r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1999 Nucleic Acid Atoms Solvent Atoms 128 Heterogen Atoms 118
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling