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Crystal Structure of Streptomyces Coelicolor A3(2) CYP158A2 from antibiotic biosynthetic pathways
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 295 sodium, malonic acid, glycerol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.08 40.79
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.25 α = 90 b = 65.553 β = 90 c = 104.245 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD BRUKER PROTEUM 300 2002-10-26 M MAD 2 1 x-ray 200 IMAGE PLATE RIGAKU RAXIS 2002-09-28 M SINGLE WAVELENGTH 3 1 x-ray 200 CCD BRUKER PROTEUM 300 2003-03-18 M MAD 1,2,3 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 0.9975,1.0055,1.0090 APS 22-ID 2 ROTATING ANODE RIGAKU RU200 1.5418 3 SYNCHROTRON APS BEAMLINE 22-ID 1.6513,1.72,1.741 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3 1.5 29.26 92.5 0.067 0.059 27.6 25.8 60354 55989 1 1 21
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2,3 1.5 1.55 85.5 0.63 0.76 1.5 5.6 5098
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION combination with MAD phase and SIR phase THROUGHOUT 1.5 29.26 60283 54123 5513 89.7 0.203 0.203 0.202 0.2008 0.216 RANDOM 22.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.07 -1.27 0.2
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 21.2 c_scangle_it 2.77 c_scbond_it 1.92 c_mcangle_it 1.84 c_angle_deg 1.2 c_mcbond_it 1.17 c_improper_angle_d 0.92 c_bond_d 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3053 Nucleic Acid Atoms Solvent Atoms 326 Heterogen Atoms 76
Software Software Software Name Purpose CNS refinement MAR345 data collection SCALEPACK data scaling SOLVE phasing