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Reduced flavin reductase PheA2 in complex with NAD
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1RZ0
Crystallization Crystal Properties Matthews coefficient Solvent content 2.38 47.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.693 α = 90 b = 156.457 β = 91.11 c = 83.925 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-02-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 1.0 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 15 96.3 80392 77418
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1RZ0 2.1 15 74830 1560 95.15 0.23726 0.23726 0.23686 0.2341 0.25604 0.2604 RANDOM 34.413
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.23 -0.6 1.06 0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.547 r_scangle_it 3.818 r_scbond_it 2.38 r_mcangle_it 1.604 r_angle_refined_deg 1.489 r_mcbond_it 0.818 r_symmetry_vdw_refined 0.549 r_symmetry_hbond_refined 0.426 r_nbd_refined 0.21 r_xyhbond_nbd_refined 0.166
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.547 r_scangle_it 3.818 r_scbond_it 2.38 r_mcangle_it 1.604 r_angle_refined_deg 1.489 r_mcbond_it 0.818 r_symmetry_vdw_refined 0.549 r_symmetry_hbond_refined 0.426 r_nbd_refined 0.21 r_xyhbond_nbd_refined 0.166 r_chiral_restr 0.091 r_bond_refined_d 0.015 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9408 Nucleic Acid Atoms Solvent Atoms 397 Heterogen Atoms 776
Software Software Software Name Purpose REFMAC refinement MAR345 data collection CCP4 data scaling CCP4 phasing