1RT0

12-mer from site II calbindin D9K (DKNGDGEVSFEE) coordinating Zn(II)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D TOCSY3mM Peptide and Zn(NO3)2. NaOH and HNO3 added for pH fixing to 7; 80% H2O, 20% D2O80% H2O, 20% D2Oaprox 07ambient288
2noesyjr3mM Peptide and Zn(NO3)2. NaOH and HNO3 added for pH fixing to 7; 80% H2O, 20% D2O80% H2O, 20% D2Oaprox 07ambient288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITY600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsafter a matrix relaxationNMRPipe
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number50
Conformers Submitted Total Number10
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe1.0F. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer, A. Bax
2iterative matrix relaxationMARDIGRAS3.2James, Borgias, Thomas, Liu, Kumar, Tonelli
3structure solutionDYANA1.5Guenter, Mumenthaler, Herrmann
4refinementDYANA1.5Guenter, Mumenthaler, Herrmann