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CALCIUM-PHOSPHOLIPID BINDING DOMAIN FROM CYTOSOLIC PHOSPHOLIPASE A2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 5-10MG/ML PROTEIN, 5MM CACL2, 1M SODIUM ACETATE, 0.1M HEPES (PH 7.5), 50MM CDSO4
Crystal Properties Matthews coefficient Solvent content 5 70
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.41 α = 90 b = 79.41 β = 90 c = 70.67 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH BENT MIRROR 1997-07-07 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 31 98.8 0.086 0.086 18 4.4 11798 41
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.35 86 0.31 0.31 3.4 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.4 15 9339 1003 99.7 0.227 0.2115 0.273 0.2461 SHELLS OF RESOLUTION 25
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.3 p_staggered_tor 20.1 p_planar_tor 4.1 p_scbond_it 3 p_scangle_it 2.061 p_mcangle_it 1.764 p_mcbond_it 1.012 p_hb_or_metal_coord 0.251 p_multtor_nbd 0.232 p_singtor_nbd 0.191
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.3 p_staggered_tor 20.1 p_planar_tor 4.1 p_scbond_it 3 p_scangle_it 2.061 p_mcangle_it 1.764 p_mcbond_it 1.012 p_hb_or_metal_coord 0.251 p_multtor_nbd 0.232 p_singtor_nbd 0.191 p_chiral_restr 0.097 p_angle_d 0.025 p_planar_d 0.025 p_bond_d 0.007 p_angle_deg p_plane_restr p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 151 Heterogen Atoms
Software Software Software Name Purpose SHARP phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling