1R6P
NMR structure of the N-terminal domain of trout cardiac troponin C at 7 C
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 15N HSQC | 1.34 mM N-domain of trout cardiac troponin C U-15N; 10 mM imidazol; 100 mM KCl; 0.03% NaN3; 20 mM DTT; 0.2 mM DSS; ~4 mM CaCl2 | 90% H2O/10% D2O | 100 mM KCl | 6.9 | 1 atm | 280 | |
2 | DIPSI-HSQC | 1.34 mM N-domain of trout cardiac troponin C U-15N; 10 mM imidazol; 100 mM KCl; 0.03% NaN3; 20 mM DTT; 0.2 mM DSS; ~4 mM CaCl2 | 90% H2O/10% D2O | 100 mM KCl | 6.9 | 1 atm | 280 | |
3 | 3D_15N-separated_NOESY | 1.34 mM N-domain of trout cardiac troponin C U-15N; 10 mM imidazol; 100 mM KCl; 0.03% NaN3; 20 mM DTT; 0.2 mM DSS; ~4 mM CaCl2 | 90% H2O/10% D2O | 100 mM KCl | 6.9 | 1 atm | 280 | |
4 | HNHA | 1.34 mM N-domain of trout cardiac troponin C U-15N; 10 mM imidazol; 100 mM KCl; 0.03% NaN3; 20 mM DTT; 0.2 mM DSS; ~4 mM CaCl2 | 90% H2O/10% D2O | 100 mM KCl | 6.9 | 1 atm | 280 | |
5 | HNHB | 1.34 mM N-domain of trout cardiac troponin C U-15N; 10 mM imidazol; 100 mM KCl; 0.03% NaN3; 20 mM DTT; 0.2 mM DSS; ~4 mM CaCl2 | 90% H2O/10% D2O | 100 mM KCl | 6.9 | 1 atm | 280 | |
6 | 2D NOESY | 1.34 mM N-domain of trout cardiac troponin C U-15N; 10 mM imidazol; 100 mM KCl; 0.03% NaN3; 20 mM DTT; 0.2 mM DSS; ~4 mM CaCl2 | 100% D2O | 100 mM KCl | 6.9 | 1 atm | 280 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 600 |
2 | Varian | INOVA | 800 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 40 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | April 2001 | Delaglio, F., Grzesiek, S., Vuister,G.W., Zhu, G., Pfeifer, J. and Bax, A. |
2 | collection | VNMR | 6.1c | Varian |
3 | refinement | X-PLOR | 3.851 | Brunger, A.T. |
4 | data analysis | NMRView | 5.0.4 | Johnson, B. and Blevins, R. |