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NMR Solution structure of the IIIc domain of GB Virus B IRES Element
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 10 mM phosphate, 10 mM KCL, 0.05 mM EDTA pH 6.8, 90% H2O, 10% D2O 90% H2O/10% D2O 10 mM KCl 6.8 ambient 298 2 2D TOCSY 10 mM phosphate, 10 mM KCL, 0.05 mM EDTA pH 6.8, 90% H2O, 10% D2O 90% H2O/10% D2O 10 mM KCl 6.8 ambient 298 3 DQF-COSY 10 mM phosphate, 10 mM KCL, 0.05 mM EDTA pH 6.8, 90% H2O, 10% D2O 90% H2O/10% D2O 10 mM KCl 6.8 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian UNITYPLUS 750 2 Varian UNITYPLUS 600
NMR Refinement Method Details Software distance geometry simulated annealing restrained molecular dynamics complete relaxation matrix X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with acceptable covalent geometry,structures with favorable non-bond energy Conformers Calculated Total Number 10 Conformers Submitted Total Number 1 Representative Model 1 (minimized average structure)
Additional NMR Experimental Information Details This structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software # Classification Version Software Name Author 1 refinement X-PLOR 3.1 BRUNGER, A 2 data analysis Felix 97 BIOSYM