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Structural Basis for Differential Recognition of Tyrosine Phosphorylated Sites in the Linker for Activation of T cells (LAT) by the Adaptor Protein Gads
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8.5 298 0.1mM Tris-HCl, 2.5M ammonium sulfate, pH 8.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.82 56.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.637 α = 90 b = 117.937 β = 108.92 c = 50.594 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV osmic mirrors 2003-04-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.84 52.3 92.72 133713 41324 2 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 30 2 38882 38882 2073 92.72 0.21745 0.21745 0.21336 0.25855 RANDOM 30.642
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.15 -0.76 1.31 -0.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 9.798 r_scangle_it 5.756 r_scbond_it 4.211 r_angle_refined_deg 2.883 r_mcangle_it 2.687 r_mcbond_it 1.779 r_angle_other_deg 1.353 r_symmetry_vdw_other 0.29 r_symmetry_vdw_refined 0.282 r_nbd_other 0.274
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 9.798 r_scangle_it 5.756 r_scbond_it 4.211 r_angle_refined_deg 2.883 r_mcangle_it 2.687 r_mcbond_it 1.779 r_angle_other_deg 1.353 r_symmetry_vdw_other 0.29 r_symmetry_vdw_refined 0.282 r_nbd_other 0.274 r_nbd_refined 0.242 r_xyhbond_nbd_refined 0.225 r_symmetry_hbond_refined 0.222 r_chiral_restr 0.202 r_nbtor_other 0.103 r_bond_refined_d 0.037 r_gen_planes_refined 0.017 r_gen_planes_other 0.012 r_bond_other_d 0.003 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3533 Nucleic Acid Atoms Solvent Atoms 441 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement CrystalClear data reduction d*TREK data scaling MOLREP phasing