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Structural Basis for Differential Recognition of Tyrosine Phosphorylated Sites in the Linker for Activation of T cells (LAT) by the Adaptor Protein Gads
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8.7 298 0.1mM Tris-HCl, 2.5M ammonium sulfate, pH 8.7, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.88 34.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.71 α = 90 b = 51.81 β = 101.38 c = 43.97 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV mirrors 2003-04-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.62 43.1 96.6 117803 26632 2 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 43.03 2 16497 16497 911 99.07 0.17906 0.17906 0.17649 0.2253 RANDOM 21.308
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.65 -0.25 -0.09 -0.66
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.934 r_scangle_it 4.814 r_scbond_it 3.19 r_mcangle_it 2.028 r_angle_refined_deg 1.924 r_mcbond_it 1.244 r_nbd_refined 0.198 r_symmetry_hbond_refined 0.195 r_symmetry_vdw_refined 0.193 r_chiral_restr 0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.934 r_scangle_it 4.814 r_scbond_it 3.19 r_mcangle_it 2.028 r_angle_refined_deg 1.924 r_mcbond_it 1.244 r_nbd_refined 0.198 r_symmetry_hbond_refined 0.195 r_symmetry_vdw_refined 0.193 r_chiral_restr 0.15 r_xyhbond_nbd_refined 0.147 r_bond_refined_d 0.023 r_gen_planes_refined 0.011 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1811 Nucleic Acid Atoms Solvent Atoms 142 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement CrystalClear data reduction d*TREK data scaling MOLREP phasing