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1.1 Angstrom Resolution Structure of the Complex Between the Protein Inhibitor, OMTKY3, and the Serine Protease, Subtilisin Carlsberg
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 0.2 M ammonium dihydrogen phosphate, 0.1 M Tris, and 50%(v/v) 2-methyl-2,4-pentanediol (MPD), pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.14 42.45
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.329 α = 90 b = 70.81 β = 90 c = 127.476 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2001-03-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9537 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.1 15.25 94.1 0.094 5.76 3.01 107101 1 1 8.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.1 1.15 92.9 0.24 0.24 1.01 2.1 13901
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.1 15.25 107101 1096 94.11 0.15873 0.15847 0.1914 0.18404 0.2123 RANDOM 14.227
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.32 1.2 -0.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.828 r_dihedral_angle_1_deg 4.966 r_scangle_it 3.359 r_scbond_it 2.383 r_mcangle_it 1.573 r_angle_refined_deg 1.475 r_mcbond_it 1.129 r_angle_other_deg 0.751 r_xyhbond_nbd_other 0.258 r_nbd_refined 0.243
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.828 r_dihedral_angle_1_deg 4.966 r_scangle_it 3.359 r_scbond_it 2.383 r_mcangle_it 1.573 r_angle_refined_deg 1.475 r_mcbond_it 1.129 r_angle_other_deg 0.751 r_xyhbond_nbd_other 0.258 r_nbd_refined 0.243 r_nbd_other 0.19 r_symmetry_vdw_other 0.181 r_xyhbond_nbd_refined 0.141 r_symmetry_hbond_refined 0.117 r_symmetry_vdw_refined 0.103 r_chiral_restr 0.092 r_bond_refined_d 0.011 r_gen_planes_refined 0.006 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2362 Nucleic Acid Atoms Solvent Atoms 405 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction d*TREK data scaling AMoRE phasing