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Structure of SP4160 Bound to IL-2 V69A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.9 298 0.05 M Zinc Acetate, 0.075 M Magnesium Chloride, 18% (w/v) Polyethylene Glycol 10K, 0.1M Sodium Cacodylate, pH 5.9. , VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.27 45.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.514 α = 90 b = 85.134 β = 90 c = 122.141 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 IMAGE PLATE RIGAKU 2003-01-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 1.08 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 15 98.5 14582 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.768 97.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 15 40387 14582 771 97.1 0.26098 0.26098 0.25844 0.2572 0.30784 0.3061 RANDOM 19.777
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.24 3.41 -0.17
RMS Deviations Key Refinement Restraint Deviation r_angle_refined_deg 14.789 r_chiral_restr 7.059 r_scangle_it 4.891 r_scbond_it 4.506 r_dihedral_angle_1_deg 3.436 r_mcangle_it 2.383 r_bond_refined_d 1.888 r_mcbond_it 1.296 r_nbd_refined 0.658 r_gen_planes_other 0.471
RMS Deviations Key Refinement Restraint Deviation r_angle_refined_deg 14.789 r_chiral_restr 7.059 r_scangle_it 4.891 r_scbond_it 4.506 r_dihedral_angle_1_deg 3.436 r_mcangle_it 2.383 r_bond_refined_d 1.888 r_mcbond_it 1.296 r_nbd_refined 0.658 r_gen_planes_other 0.471 r_xyhbond_nbd_refined 0.217 r_symmetry_vdw_refined 0.165 r_symmetry_hbond_refined 0.106 r_gen_planes_refined 0.069
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3916 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 192
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing