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TRYPAREDOXIN-I FROM CRITHIDIA FASCICULATA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 6.75MG/ML PROTEIN, 7.5% PEG MME 2000, 0.025M TRIS/HCL PH8.2, 0.25% DMSO, pH 7.50
Crystal Properties Matthews coefficient Solvent content 2.13 42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.39 α = 90 b = 50.7 β = 90 c = 70.82 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 1998-11-15 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 0.88, 0.97 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 19 94.5 0.029 145.1 2 49768 11.413
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.43 65.6 0.17 103.1 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.4 40 27853 1379 97.78 0.191 0.1881 0.223 RANDOM 15.13
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.6 p_planar_tor 17.9 p_staggered_tor 13.4 p_scangle_it 2.504 p_mcangle_it 1.821 p_scbond_it 1.766 p_mcbond_it 1.245 p_multtor_nbd 0.242 p_singtor_nbd 0.174 p_xyhbond_nbd 0.162
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 26.6 p_planar_tor 17.9 p_staggered_tor 13.4 p_scangle_it 2.504 p_mcangle_it 1.821 p_scbond_it 1.766 p_mcbond_it 1.245 p_multtor_nbd 0.242 p_singtor_nbd 0.174 p_xyhbond_nbd 0.162 p_chiral_restr 0.122 p_planar_d 0.12 p_angle_d 0.03 p_bond_d 0.014 p_angle_deg p_hb_or_metal_coord p_plane_restr p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1144 Nucleic Acid Atoms Solvent Atoms 237 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling