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NMR Solution Structure of DR0079: An hypothetical Nudix protein from D. radiodurans
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY ~2 mM DR0079; U-15N, 13C;
100 mM KCl, 20 mM potassium phosphate, 2 mM DTT, pH 7.1 90% H2O/10% D2O 100 mM KCl; 20 mM Potassium phosphate 7.1 ambient 298 2 3D_13C-separated_NOESY ~2 mM DR0079; U-15N, 13C;
100 mM KCl, 20 mM potassium phosphate, 2 mM DTT, pH 7.1 90% H2O/10% D2O 100 mM KCl; 20 mM Potassium phosphate 7.1 ambient 298 3 4D_13C-separated_NOESY ~2 mM DR0079; U-15N, 13C;
100 mM KCl, 20 mM potassium phosphate, 2 mM DTT, pH 7.1 90% H2O/10% D2O 100 mM KCl; 20 mM Potassium phosphate 7.1 ambient 298 4 IPAP-HSQC experiements for RDCs ~2 mM DR0079; U-15N, 13C;
100 mM KCl, 20 mM potassium phosphate, 2 mM DTT, pH 7.1,
pf1 filamentous phage 90% H2O/10% D2O 100 mM KCl; 20 mM Potassium phosphate 7.1 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 750 2 Varian INOVA 800 3 Varian INOVA 600
NMR Refinement Method Details Software torsion angle dynamics DYANA used for initial refinements.
CNS used for final structure calculations with RDCs. DYANA
NMR Ensemble Information Conformer Selection Criteria ten best structures, in terms of total and NOE energies Conformers Calculated Total Number 225 Conformers Submitted Total Number 10 Representative Model 6 (n/a)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution DYANA 1.5 Guentert 2 structure solution CNS 1.1 Brunger 3 processing Felix 97 MSI 4 refinement CNS 1.1 Brunger