Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
Structure of the Oncoprotein DEK: a putative DNA-binding Domain Related to the Winged Helix Motif
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
3D_15N-separated_NOESY
1.0MM DEK C-TERMINAL DOMAIN
50mM NAPO4, 100mM KCL
6.75
AMBIENT
293
2
3D_13C-separated_NOESY
1.0MM DEK C-TERMINAL DOMAIN
50mM NAPO4, 100mM KCL
6.75
AMBIENT
293
3
3D HCCH-TOCSY
1.0MM DEK C-TERMINAL DOMAIN
50mM NAPO4, 100mM KCL
6.75
AMBIENT
293
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
INOVA
600
2
Varian
INOVA
800
NMR Refinement
Method
Details
Software
simulated annealing
STRUCTURE BASED ON 1456 NON-REDUNDANT NOES, 33 HYDROGEN BOND RESTRAINTS DERIVED FROM DEUTERIUM EXCHANG EXPERIMENTS, AND 46 DIHEDRAL-ANGLE RESTRAINTS DERIVED FROM CA CHEMICAL SHIFTS.
X-PLOR
NMR Ensemble Information
Conformer Selection Criteria
STRUCTURES WITH THE LOWEST TOTAL ENERGY
Conformers Calculated Total Number
80
Conformers Submitted Total Number
10
Representative Model
1 (n/a)
Additional NMR Experimental Information
Details
DISTANCE RESTRAINTS COLLECTED FROM A NOESY SPECTRUM WITH 150MS MIXING TIME.