1Q02
NMR structure of the UBA domain of p62 (SQSTM1)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2mM UBA, phosphate buffer pH 5.8 | 10% D2O, 90% H2O | 50mM potassium phosphate | 5.8 | ambient | 298 | |
2 | 2D TOCSY | 2mM UBA, phosphate buffer pH 5.8 | 10% D2O, 90% H2O | 50mM potassium phosphate | 5.8 | ambient | 298 | |
3 | 2D NOESY | 2mM UBA, phosphate buffer pH 5.8 | 10% D2O, 90% H2O | 50mM potassium phosphate | 5.8 | ambient | 308 | |
4 | 2D TOCSY | 2mM UBA, phosphate buffer pH 5.8 | 10% D2O, 90% H2O | 50mM potassium phosphate | 5.8 | ambient | 308 | |
5 | DQF-COSY | 2mM UBA, phosphate buffer pH 5.8 | 90% D2O, 10% H2O | 50mM potassium phosphate | 5.8 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
restrained simulated annealing | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 27 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | 2.5 | Bruker |
2 | structure solution | X-PLOR | 3.1 | Brunger, AT |
3 | data analysis | ANSIG | 3.3 | Kraulis, PJ |
4 | refinement | X-PLOR | 3.1 | Brunger, AT |