1PUX
NMR Solution Structure of BeF3-Activated Spo0F, 20 conformers
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | Uniform labeling with 15N and 13C | 1 mM Spo0F, 20 mM HEPES, 50 mM MgCl2, 6 mM BeCl2, and 60 mM NaF, 10% D20 | 50 mM MgCl2, 6 mM BeCl2, 60 mM NaF | 6.85 | 1 atm | 298 | |
2 | 3D_15N-separated_NOESY | Uniform labeling with 15N and 13C | 1 mM Spo0F, 20 mM HEPES, 50 mM MgCl2, 6 mM BeCl2, and 60 mM NaF, 10% D20 | 50 mM MgCl2, 6 mM BeCl2, 60 mM NaF | 6.85 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 500 |
2 | Bruker | DMX | 600 |
3 | Bruker | DMX | 750 |
NMR Refinement | ||
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Method | Details | Software |
Torsion angle dynamics and simulated annealing | Structure based on a total of 1,835 distance constraints (obtained from 4,221 NOE crosspeaks), including 602 intraresidual, 504 short-range, 310 medium-range, and 383 long-range constraints as well as 165 dihedral angle restraints for a total of 2,000 restraints. DYANA 1.5 anneal command (20000) steps was used to generate 60 conformers. 20 lowest target function structures were analyzed. | DYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 60 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | This structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | DYANA | 1.5 | Guntert, P |
2 | refinement | DYANA | 1.5 | Guntert, P |
3 | data analysis | XEASY | 1.3.12 | Bartels, C |