1PSB

Solution structure of calcium loaded S100B complexed to a peptide from N-Terminal regulatory domain of NDR kinase.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1 mM 1H,15N labeled protein 1 mM unlabeled peptide 20 mM d-11 tris and 10mM d10-DTT 5 mM CaCl2 and 30mM KCL90% H2O/10% D2O0.045 M/L7.5ambient310
23D_13C-separated_NOESY1 mM 1H,13C,15N labeled protein 1 mM unlabeled peptide 20 mM d-11 tris and 10mM d10-DTT 5 mM CaCl2 and 30mM KCL90% H2O/10% D2O0.045 M/L7.5ambient310
33D_13C-separated_NOESY1 mM 1H,13C,15N labeled protein 1 mM unlabeled peptide 20 mM d-11 tris and 10mM d10-DTT 5 mM CaCl2 and 30mM KCL100% D2O0.045 M/L7.5ambient310
42D_15N/13C_F2-Filtered_NOESY1 mM 1H,13C,15N labeled protein 1 mM unlabeled peptide 20 mM d-11 tris and 10mM d10-DTT 5 mM CaCl2 and 30mM KCL90% H2O/10% D2O0.045 M/L7.5ambient310
53D_13C-F1_separated_13C/15N-F2_Filtered_HMQC-NOESY1 mM 1H,13C,15N labeled protein 1 mM unlabeled peptide 20 mM d-11 tris and 10mM d10-DTT 5 mM CaCl2 and 30mM KCL90% H2O/10% D2O0.045 M/L7.5ambient310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
Torsion Angle Dynamics, Restrained Molecular Dynamics, Simulated Annealing,The structures are based on a total of 3274 restraints, 2964 are NOE-derived distance constraints and 310 dihedral angle restraints.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number128
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsProtein Backbone/Side-Chain Assignments were made from 3D CBCA(CO)NH, 3D HNCA, 3D HN(CO)CA, 3D HNCO 3D HCCH-TOCSY, 3D HCCH-COSY experiments. Peptide was assigned from 2D-Filtered COSY/TOCSY Experiments.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.0Bruker
2processingFelix2000Accelrys
3data analysisFelix2000Accelrys
4structure solutionDYANA1.5Guentert
5refinementAmber7.0Pearlman, Case, Caldwell, Seibel, Chandra Singh, Weiner, Kollman