1P8B
SOLUTION STRUCTURE OF PA1B, A 37-AMINO ACID INSECTICIDAL PROTEIN EXTRACTED FROM PEA SEEDS (PISUM SATIVUM)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2.1mM PA1b; 0.02% NaN3; 50% H2O, 50% TFE-d2 | 50% H20, 50% TFE-d2 | 4.8 | ambient | 293 | ||
2 | 2D TOCSY | 2.1mM PA1b; 0.02% NaN3; 50% H2O, 50% TFE-d2 | 50% H20, 50% TFE-d2 | 4.8 | ambient | 293 | ||
3 | DQF-COSY | 2.1mM PA1b; 0.02% NaN3; 50% H2O, 50% TFE-d2 | 50% H20, 50% TFE-d2 | 4.8 | ambient | 293 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
Torsion angle simulated annealing, molecular dynamics in explicit solvent | The structures are based on 858 NOE-derived distance restraints, 15 dihedral angle restraints and 7 hydrogen bond restraints | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (fewest violations) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 2D homonuclear techniques. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2.1 | Delaglio |
2 | data analysis | XEASY | 6001 | Bartels |
3 | structure solution | CNS | 1.1 | Brunger |
4 | structure solution | ARIA | 1.1 | Linge |
5 | refinement | ARIA | 1.1 | Linge |