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CRYSTAL STRUCTURE OF FOUR-HELIX BUNDLE MODEL di-Mn(II)-DF1-L13
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 peg 400, Buffer Tris-HCl, pH 7.50, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.57 54.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.888 α = 90 b = 149.177 β = 90 c = 38.578 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH MIRROR 2001-06-15 M 1.200
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 5.2R 1.2000 ELETTRA 5.2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.99 76.4 98.1 0.051 0.051 16.5 2.2 5371 56
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.91 2.01 98.1 0.168 0.168 7 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION UNCONVENTIONAL METHOD USING THE GROUP-SUBGROUP RELATION THROUGHOUT 2.99 15 5371 240 98.1 0.22931 0.2258 0.2218 0.30542 0.2944 RANDOM 32.402
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.35 0.2 0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 25.439 r_scangle_it 9.07 r_dihedral_angle_1_deg 5.939 r_scbond_it 5.441 r_mcangle_it 2.98 r_angle_refined_deg 1.857 r_mcbond_it 1.408 r_nbd_refined 0.297 r_symmetry_vdw_refined 0.274 r_symmetry_hbond_refined 0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 25.439 r_scangle_it 9.07 r_dihedral_angle_1_deg 5.939 r_scbond_it 5.441 r_mcangle_it 2.98 r_angle_refined_deg 1.857 r_mcbond_it 1.408 r_nbd_refined 0.297 r_symmetry_vdw_refined 0.274 r_symmetry_hbond_refined 0.26 r_xyhbond_nbd_refined 0.182 r_chiral_restr 0.132 r_bond_refined_d 0.023 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1664 Nucleic Acid Atoms Solvent Atoms 38 Heterogen Atoms 5
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling REFMAC refinement CCP4 data scaling