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Biosynthetic thiolase from Zoogloea ramigera in complex with acetyl-O-pantetheine-11-pivalate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 288 ammonium sulfate, lithium sulfate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 288K
Crystal Properties Matthews coefficient Solvent content 2.73 54.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.38 α = 90 b = 78.95 β = 92.96 c = 148.82 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.07 20 93.9 0.1 9.5 2.8 111939 111939 -3 23
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.07 2.2 83.6 0.232 4.5 2.2 36071
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.07 20 111938 111938 4876 94.32 0.16307 0.16307 0.16081 0.1712 0.21171 0.2184 RANDOM 9.895
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.87 0.01 -0.52 2.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.297 r_scangle_it 4.134 r_scbond_it 2.854 r_mcangle_it 2.656 r_mcbond_it 1.935 r_angle_refined_deg 1.432 r_angle_other_deg 0.836 r_symmetry_vdw_other 0.275 r_nbd_other 0.244 r_symmetry_hbond_refined 0.213
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.297 r_scangle_it 4.134 r_scbond_it 2.854 r_mcangle_it 2.656 r_mcbond_it 1.935 r_angle_refined_deg 1.432 r_angle_other_deg 0.836 r_symmetry_vdw_other 0.275 r_nbd_other 0.244 r_symmetry_hbond_refined 0.213 r_nbd_refined 0.208 r_xyhbond_nbd_refined 0.206 r_symmetry_vdw_refined 0.129 r_chiral_restr 0.088 r_nbtor_other 0.087 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_gen_planes_other 0.004 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11336 Nucleic Acid Atoms Solvent Atoms 1557 Heterogen Atoms 74
Software Software Software Name Purpose XDS data scaling XDS data reduction REFMAC refinement