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Crystal structure of FIP-Fve fungal immunomodulatory protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 294 PEG 400, ammonium sulfate, Tris-base, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.67 53.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 97.118 α = 90 b = 97.118 β = 90 c = 61.413 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD PHILLIPS 2002-03-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X12C 0.9202 NSLS X12C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 30 99.96 0.045 28.1 14.1 32880 32880 15.319
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.7 1.76 100 0.187 16.7 3249
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.7 30.02 32880 30783 1650 98.8 0.18358 0.18358 0.18218 0.2652 0.21016 RANDOM 13.666
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.02 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.844 r_dihedral_angle_1_deg 4.899 r_scangle_it 3.839 r_scbond_it 2.292 r_mcangle_it 1.603 r_angle_refined_deg 1.466 r_angle_other_deg 0.921 r_mcbond_it 0.898 r_symmetry_vdw_refined 0.31 r_symmetry_vdw_other 0.291
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.844 r_dihedral_angle_1_deg 4.899 r_scangle_it 3.839 r_scbond_it 2.292 r_mcangle_it 1.603 r_angle_refined_deg 1.466 r_angle_other_deg 0.921 r_mcbond_it 0.898 r_symmetry_vdw_refined 0.31 r_symmetry_vdw_other 0.291 r_nbd_refined 0.271 r_chiral_restr 0.231 r_nbd_other 0.212 r_symmetry_hbond_refined 0.144 r_xyhbond_nbd_refined 0.131 r_bond_refined_d 0.01 r_gen_planes_refined 0.006 r_gen_planes_other 0.003 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1788 Nucleic Acid Atoms Solvent Atoms 136 Heterogen Atoms 16
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing REFMAC refinement