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OMPR DNA-BINDING DOMAIN, ESCHERICHIA COLI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 PROTEIN WAS CRYSTALLIZED FROM 3% POLYETHYLENEGLYCOL-MONOMETHYLETHER (PMME) 5000, 17.5% ETHYLENEGLYCOL, 2.5% MPD, 30 MM MES, PH 6.5; THEN SOAKED IN 10% PMME 5000, 20% ETHYLENEGLYCOL, 10% PEG 200, 200 MM AMMONIUM SULFATE, 30 MM MES, PH 6.5
Crystal Properties Matthews coefficient Solvent content 2.45 41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.14 α = 90 b = 59.14 β = 90 c = 58.11 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE FUJI MONOCHROMATOR 1996-06-18 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4A 0.9686, 0.9876 NSLS X4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 10 97.1 0.046 10.8 7.1 8604 -3 16.78
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.95 2 98.7 0.086 6.9 5.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.95 5 8195 7807 388 97.1 0.228 0.269 0.2485 RANDOM 20.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_special_tor 31.6 p_transverse_tor 22.6 p_staggered_tor 20 p_planar_tor 7.9 p_scangle_it 2.943 p_mcangle_it 2.605 p_mcbond_it 1.933 p_scbond_it 1.696 p_multtor_nbd 0.268 p_singtor_nbd 0.195
RMS Deviations Key Refinement Restraint Deviation p_special_tor 31.6 p_transverse_tor 22.6 p_staggered_tor 20 p_planar_tor 7.9 p_scangle_it 2.943 p_mcangle_it 2.605 p_mcbond_it 1.933 p_scbond_it 1.696 p_multtor_nbd 0.268 p_singtor_nbd 0.195 p_xyhbond_nbd 0.159 p_chiral_restr 0.137 p_planar_d 0.037 p_angle_d 0.036 p_bond_d 0.017 p_plane_restr 0.016 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 806 Nucleic Acid Atoms Solvent Atoms 85 Heterogen Atoms
Software Software Software Name Purpose MADSYS phasing PROLSQ refinement DENZO data reduction SCALEPACK data scaling