1OP4
Solution Structure of Neural Cadherin Prodomain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1mM N-cadherin prodomain (15N,13C), 50mM phosphate buffer | 90% H2O/10% D2O | 6.0 | 1 atm | 303 | ||
2 | 3D_15N-separated_NOESY | 1mM N-cadherin prodomain (15N,13C), 50mM phosphate buffer | 90% H2O/10% D2O | 6.0 | 1 atm | 303 | ||
3 | HNHA | 1mM N-cadherin prodomain (15N,13C), 50mM phosphate buffer | 90% H2O/10% D2O | 6.0 | 1 atm | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | ||
2 | structure solution | X-PLOR | ||
3 | collection | XwinNMR | ||
4 | refinement | ARIA |