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Atomic resolution structure of 'Half Apo' NiR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 40% PEG MME 550, 0.1M MES PH 6.5, 10MM ZNSO4
Crystal Properties Matthews coefficient Solvent content 1.85 51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.243 α = 90 b = 79.243 β = 90 c = 99.679 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2000-05-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 60 92.9 0.033 27.3 11.9 110729
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.15 1.17 61.2 0.283 2 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.15 50 116696 3186 93 0.1143 0.1161 0.1482 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 6 2457 3083.52
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.089 s_zero_chiral_vol 0.087 s_from_restr_planes 0.0359 s_similar_adp_cmpnt 0.035 s_angle_d 0.032 s_bond_d 0.016 s_rigid_bond_adp_cmpnt 0.005 s_similar_dist s_anti_bump_dis_restr s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2574 Nucleic Acid Atoms Solvent Atoms 553 Heterogen Atoms 25
Software Software Software Name Purpose SHELXL-97 refinement DENZO data reduction SCALEPACK data scaling SHELX phasing