☰ Navigation Tabs
BACTERIORHODOPSIN L INTERMEDIATE AT 1.62 A RESOLUTION
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1M0L PDB ENTRY 1M0L
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 CUBIC LIPID PHASE 5.6 295 POTASSIUM [PHOSPHATE, pH 5.60, CUBIC LIPID PHASE, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.77 42.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.801 α = 90 b = 60.801 β = 90 c = 107.778 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 2002-06-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.1 0.979 ALS 8.2.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.62 25 99.7 0.058 36.1 28181 28097 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.62 1.69 88.9 0.593 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R PDB ENTRY 1M0L 1.62 25 26483 1650 85.5 0.1544 0.2115 THIN SHELLS
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 230 2073.02
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.06 s_angle_d 0.049 s_zero_chiral_vol 0.049 s_anti_bump_dis_restr 0.04 s_from_restr_planes 0.0229 s_bond_d 0.016
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1720 Nucleic Acid Atoms Solvent Atoms 23 Heterogen Atoms 329
Software Software Software Name Purpose HKL-2000 data collection HKL-2000 data reduction SHELX model building SHELXL-97 refinement HKL-2000 data reduction HKL-2000 data scaling SHELX phasing