☰ Navigation Tabs
Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitopentaose
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.1 pH 5.1
Crystal Properties Matthews coefficient Solvent content 2.6 50.23
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 128.32 α = 90 b = 128.32 β = 90 c = 108.58 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 IMAGE PLATE MAC Science DIP-2030 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE OTHER
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 29.92 97.9 0.114 10.1 3.8 59975 45.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 96.1 0.626 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.5 29.92 59975 8129 98.5 0.218 0.218 0.2311 0.253 0.2627 RANDOM 36.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.78 5.78 -11.56
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 24 c_scangle_it 5.71 c_scbond_it 4.22 c_mcangle_it 4.03 c_mcbond_it 2.7 c_angle_deg 1.2 c_improper_angle_d 0.7 c_bond_d 0.005 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 24 c_scangle_it 5.71 c_scbond_it 4.22 c_mcangle_it 4.03 c_mcbond_it 2.7 c_angle_deg 1.2 c_improper_angle_d 0.7 c_bond_d 0.005 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11361 Nucleic Acid Atoms Solvent Atoms 470 Heterogen Atoms 438
Software Software Software Name Purpose CNS refinement DENZO data reduction SCALEPACK data scaling