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Structure of truncated variant of B.subtilis SPP1 phage G39P helicase loader/inhibitor protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 290 sodium citrate, ammonium sulphate, pH 5., VAPOR DIFFUSION, SITTING DROP, temperature 290K
Crystal Properties Matthews coefficient Solvent content 4.44 72.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.9 α = 90 b = 91.3 β = 90 c = 48.4 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2000-05-05 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM30A 0.9795 ESRF BM30A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 20 93 0.054 0.054 13.3 5.7 161039 161039 57.01
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.46 81 0.262 0.262 2.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.4 15 14548 14548 752 96.56 0.20565 0.20565 0.2043 0.206 0.23227 0.2379 RANDOM 36.488
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.26 -5.49 8.76
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 17.338 r_scangle_it 4.624 r_dihedral_angle_1_deg 3.511 r_scbond_it 3.001 r_angle_refined_deg 1.603 r_mcangle_it 1.412 r_mcbond_it 0.739 r_nbd_refined 0.239 r_xyhbond_nbd_refined 0.157 r_symmetry_vdw_refined 0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 17.338 r_scangle_it 4.624 r_dihedral_angle_1_deg 3.511 r_scbond_it 3.001 r_angle_refined_deg 1.603 r_mcangle_it 1.412 r_mcbond_it 0.739 r_nbd_refined 0.239 r_xyhbond_nbd_refined 0.157 r_symmetry_vdw_refined 0.11 r_chiral_restr 0.101 r_symmetry_hbond_refined 0.077 r_bond_refined_d 0.017 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1538 Nucleic Acid Atoms Solvent Atoms 41 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing REFMAC refinement