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hypothetical protein from Pyrococcus furiosus Pfu-1218608
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 modified microbatch 5.6 291 PEG 4000, isopropanol, sodium citrate, pH 5.6, modified microbatch, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.94 57.79
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.14 α = 83.7 b = 50.842 β = 81.64 c = 64.403 γ = 81.77
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2002-10-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.06 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.89 50 0.05 21 49644 46373 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.89 1.96 67.2 0.193 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT 1.9 20 48882 43513 2343 93.9 0.21692 0.21592 0.23498 0.2657 RANDOM 33.121
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.52 -1.2 1.81 1.47 -0.51 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.911 r_scangle_it 2.213 r_scbond_it 1.309 r_angle_refined_deg 1.136 r_mcangle_it 0.98 r_angle_other_deg 0.795 r_mcbond_it 0.531 r_nbd_other 0.22 r_symmetry_vdw_other 0.209 r_nbd_refined 0.2
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.911 r_scangle_it 2.213 r_scbond_it 1.309 r_angle_refined_deg 1.136 r_mcangle_it 0.98 r_angle_other_deg 0.795 r_mcbond_it 0.531 r_nbd_other 0.22 r_symmetry_vdw_other 0.209 r_nbd_refined 0.2 r_symmetry_hbond_refined 0.134 r_xyhbond_nbd_refined 0.131 r_nbtor_other 0.11 r_chiral_restr 0.073 r_bond_refined_d 0.01 r_symmetry_vdw_refined 0.009 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3815 Nucleic Acid Atoms Solvent Atoms 106 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement MAR345 data collection SCALEPACK data scaling SOLVE phasing