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CRYSTAL STRUCTURE OF THE SECA PROTEIN TRANSLOCATION ATPASE FROM MYCOBACTERIUM TUBERCULOSIS COMPLEX WITH ADPBS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 289 Tris.HCl, sodium formate, glycerol, magnesium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 289.0K
Crystal Properties Matthews coefficient Solvent content 4.34 71.63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 206.05 α = 90 b = 206.05 β = 90 c = 292.857 γ = 120
Symmetry Space Group P 62 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 173 CCD CUSTOM-MADE 2002-07-21 M SINGLE WAVELENGTH 2 1 x-ray 173 CCD ADSC QUANTUM 4 2001-12-23 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 1.0332 APS 19-ID 2 SYNCHROTRON APS BEAMLINE 14-BM-D 0.9611, 0.9797, 0.98, 1.00348 APS 14-BM-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.4 95.35 98.1 0.089 139810 139810 -3 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.4 2.49 98.2 0.483 13803
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.601 95.35 1 105541 5631 99.01 0.21574 0.21316 0.26498 RANDOM 18.082
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.17 -0.09 -0.17 0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.051 r_scangle_it 3.533 r_scbond_it 2.105 r_angle_refined_deg 1.564 r_mcangle_it 1.279 r_mcbond_it 0.654 r_symmetry_vdw_refined 0.262 r_nbd_refined 0.234 r_symmetry_hbond_refined 0.197 r_xyhbond_nbd_refined 0.172
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.051 r_scangle_it 3.533 r_scbond_it 2.105 r_angle_refined_deg 1.564 r_mcangle_it 1.279 r_mcbond_it 0.654 r_symmetry_vdw_refined 0.262 r_nbd_refined 0.234 r_symmetry_hbond_refined 0.197 r_xyhbond_nbd_refined 0.172 r_chiral_restr 0.112 r_bond_refined_d 0.015 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13260 Nucleic Acid Atoms Solvent Atoms 546 Heterogen Atoms 56
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SHARP phasing