1N2W
Solution Structure of 8OG:G mismatch containing duplex
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2 mM DNA, 10 mM Sodium phosphate buffer | 100% D2O | 6.8 | ambient | 298 | ||
2 | 2D TOCSY | 2 mM DNA, 10 mM Sodium phosphate buffer | 100% D2O | 6.8 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 750 |
2 | Varian | UNITYPLUS | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
Relaxation matrix refinement, molecular dynamics, simulated annealing | VNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 1 |
Conformers Submitted Total Number | 1 |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | VNMR | x | Varian |
2 | iterative matrix relaxation | MORASS | 2.5 | Meadows |
3 | refinement | Amber | 5.0 | UCSF |